Tool market

NIH: Mesh Get Term

Retrieve full details for a specific MeSH descriptor by its numeric ID (as returned by mesh_search). Returns the preferred term name, scope note, MeSH tree classification numbers, and entry terms. Search and retrieve biomedical research articles from PubMed, PMC, and MeSH databases. Provides structured metadata, full-text extraction, and clinical research filtering. Fulfilled by Parse from ncbi.nlm.nih.gov.

NIH via Parse

NIH: Get Search Results Count

Get the total count of PubMed results for a query without retrieving article details. Useful for gauging result volume before fetching. Search and retrieve biomedical literature from PubMed. Supports full metadata extraction, clinical queries, advanced search syntax, citation matching, and direct E-utilities access. Fulfilled by Parse from pubmed.ncbi.nlm.nih.gov.

NIH via Parse

Snpedia: Get Genotype

Get detailed properties for a specific genotype page, including alleles, magnitude, repute, summary, and associated SNP. Genotype titles follow the format Rs<number>(<allele1>;<allele2>). Returns stale_input if the genotype page does not exist. Comprehensive API for SNPedia, the wiki for human genetics. Provides endpoints to list and retrieve detailed data for SNPs, genotypes, genes, medical conditions, and medicines. Fulfilled by Parse from snpedia.com.

Snpedia via Parse

Physionet: Search Resources

Search for PhysioNet resources (datasets, software, challenges, models) by keyword. Returns paginated results with metadata about each matching resource including title, slug, version, authors, description, tags, and access level. Paginates via integer page number. Server-side filtering is limited to query, type, and sort order. Access PhysioNet resources including datasets, software, challenges, models, news, and file contents. Fulfilled by Parse from physionet.org.

Physionet via Parse

Physionet: Get File Content

Retrieve the text content of a specific metadata or text-based file from an Open Access dataset. Returns an upstream error for binary files or credentialed datasets. Content is capped at 100,000 characters. Access PhysioNet resources including datasets, software, challenges, models, news, and file contents. Fulfilled by Parse from physionet.org.

Physionet via Parse

NIH: Get Article

Retrieve full article content by PMC ID. Returns the article title, abstract, structured body sections (keyed by section title), authors with affiliations, and a list of cited references. Fetches the XML full-text from NCBI efetch and parses it. API for PubMed Central (PMC), providing access to full-text research articles, metadata, citations, similar articles, and journal information via NCBI E-utilities. Fulfilled by Parse from pmc.ncbi.nlm.nih.gov.

NIH via Parse

NIH: Get Similar Articles

Get similar articles for a given PMID using PubMed's related articles algorithm. Returns up to 10 similar articles with summaries. Coverage depends on PubMed's similarity index; very recent articles may return fewer results. Search and retrieve biomedical literature from PubMed. Supports full metadata extraction, clinical queries, advanced search syntax, citation matching, and direct E-utilities access. Fulfilled by Parse from pubmed.ncbi.nlm.nih.gov.

NIH via Parse

Physionet: Get Dataset Detail

Retrieve full metadata for a specific dataset version including title, DOI, abstract, citation, authors, and publication info. Returns input_not_found if the slug/version combination does not exist on PhysioNet. Access PhysioNet resources including datasets, software, challenges, models, news, and file contents. Fulfilled by Parse from physionet.org.

Physionet via Parse

NIH: Mesh Search

Search the MeSH (Medical Subject Headings) vocabulary for terms matching a query. Returns matching descriptors with unique identifiers, definitions, and entry terms (synonyms). Each result carries a numeric ID usable with mesh_get_term for tree classification. Search and retrieve biomedical research articles from PubMed, PMC, and MeSH databases. Provides structured metadata, full-text extraction, and clinical research filtering. Fulfilled by Parse from ncbi.nlm.nih.gov.

NIH via Parse

Chemoinfolab: Search Database

Search the antifungal peptide database (AFP20200317) containing over 400,000 putative sequences. Supports filtering by peptide ID, subsequence match, sequence length range, and Antifungal Index (AFI) range. Returns paginated results with 20 items per page. API for searching, predicting, and designing antifungal peptides using the Antifungipept platform's machine learning tools. Fulfilled by Parse from antifungipept.chemoinfolab.com.

Chemoinfolab via Parse

Incibeauty: Search Products And Ingredients

Search for products, ingredients, and articles by keyword. Returns paginated results including product listings, related ingredient links, editorial articles, and brand suggestions. Use page param to paginate through product results. Access cosmetic ingredient data and product safety ratings from INCI Beauty Fulfilled by Parse from incibeauty.com.

Incibeauty via Parse

NIH: Pmc Get Article

Retrieve full text and structured sections for a PMC article by its PMCID. Extracts labeled sections (methods, results, conclusions, limitations) when present. For publisher-restricted articles, returns the abstract as full_text. Truncates full_text at 20000 characters. Search and retrieve biomedical research articles from PubMed, PMC, and MeSH databases. Provides structured metadata, full-text extraction, and clinical research filtering. Fulfilled by Parse from ncbi.nlm.nih.gov.

NIH via Parse

Acefitness: Browse Articles

Browse ACE Fitness blog articles, optionally filtered by category slug. Returns the most recent articles with title, URL, date, author, category, description, and image. Search the ACE exercise library, browse fitness articles, calculate BMI, and find certified trainers near a US ZIP code. Fulfilled by Parse from acefitness.org.

Acefitness via Parse

Radiopaedia: Get Recent Articles

Extracts titles of recently updated articles from the Radiopaedia 'Recent Edits' page. Returns up to 50 articles with title, URL, and relative update timestamp. No parameters required; reflects the current state of the edits page. Scraper for Radiopaedia.org to extract medical cases, images, and recent article updates. Fulfilled by Parse from radiopaedia.org.

Radiopaedia via Parse

NIH: List Journals

Search for journals indexed in NLM catalog that are available through NCBI. Returns journal name, ISSN, and publisher information. Omitting the query returns recently indexed journals. API for PubMed Central (PMC), providing access to full-text research articles, metadata, citations, similar articles, and journal information via NCBI E-utilities. Fulfilled by Parse from pmc.ncbi.nlm.nih.gov.

NIH via Parse

Chemoinfolab: Get Peptide Detail

Get detailed information about a specific antifungal peptide including basic properties, antifungal probability, and predicted MIC values against multiple Candida species and Cryptococcus neoformans. API for searching, predicting, and designing antifungal peptides using the Antifungipept platform's machine learning tools. Fulfilled by Parse from antifungipept.chemoinfolab.com.

Chemoinfolab via Parse

Isyslab: Browse By Classification

Browse all peptides within a given classification category. Returns all peptides belonging to the specified classification with their basic information. The six classification categories are: Antimicrobial, Toxin and venom peptide, Cytokine/Growth factor, Hormone, Neuropeptide, Other. Access the StraPep database of bioactive peptide structures, including search by name/sequence/family, detailed peptide information with GO terms and PDB structures, and browsing by classification. Fulfilled by Parse from isyslab.info.

Isyslab via Parse

NIH: Search Articles

Full-text search over PubMed Central articles by keyword. Supports PubMed query syntax including Boolean operators and field qualifiers. Returns paginated article summaries with identifiers, titles, authors, journals, and publication dates. Sort by relevance (default) or date. API for PubMed Central (PMC), providing access to full-text research articles, metadata, citations, similar articles, and journal information via NCBI E-utilities. Fulfilled by Parse from pmc.ncbi.nlm.nih.gov.

NIH via Parse

NIH: Get Article Details

Retrieve full metadata and abstract for a single PubMed article by its PMID. Includes structured author list with affiliations, journal info, abstract text, MeSH keywords, DOI, PMCID, and up to 10 similar article PMIDs via PubMed's relatedness algorithm. Search and retrieve biomedical literature from PubMed. Supports full metadata extraction, clinical queries, advanced search syntax, citation matching, and direct E-utilities access. Fulfilled by Parse from pubmed.ncbi.nlm.nih.gov.

NIH via Parse

Aapc: Get Cpt Sections

Get top-level CPT code sections. Returns the major CPT code categories (e.g., Anesthesia, Surgery, Radiology, Evaluation and Management). Each section contains a label, code range, and URL. API for AAPC Codify medical code lookup — CPT, ICD-10-CM, ICD-10-PCS, and HCPCS codes with hierarchical browsing and search. Fulfilled by Parse from aapc.com.

Aapc via Parse

NIH: Get Article Citations

Get articles in PMC that cite a specific article. Uses NCBI elink's pmc_pmc_citedby linkname to find citing articles, then returns up to 50 summaries with PMC IDs, titles, journals, and publication dates. API for PubMed Central (PMC), providing access to full-text research articles, metadata, citations, similar articles, and journal information via NCBI E-utilities. Fulfilled by Parse from pmc.ncbi.nlm.nih.gov.

NIH via Parse

Mitomap: Get Rna Mutations Table

Extract all RNA mutation data from the MutationsRNA table. Returns the full set of rRNA/tRNA mutations with associated disease, status, and frequency information. Contains approximately 489 mutations. No pagination — returns the complete dataset in one call. Access mitochondrial DNA mutation data from MITOMAP, including RNA mutations, coding/control region mutations, position-based variant search, and GenBank frequency information. Fulfilled by Parse from mitomap.org.

Mitomap via Parse

NIH: Search By Article Type

Search articles filtered by publication type. Appends a [Publication Type] tag to the query. Returns a single page of article summaries. Search and retrieve biomedical literature from PubMed. Supports full metadata extraction, clinical queries, advanced search syntax, citation matching, and direct E-utilities access. Fulfilled by Parse from pubmed.ncbi.nlm.nih.gov.

NIH via Parse

Pubmed: Get Related Articles

Find articles related to a given PubMed article using NCBI's computed similarity scores. Returns article summaries for papers the system considers topically similar. Very new articles may not yet have computed relationships. Search and retrieve research paper metadata from PubMed, the biomedical literature database maintained by NCBI/NLM. Fulfilled by Parse from pubmed.com.

Pubmed via Parse

NIH: Pubmed Search

Full-text search across all PubMed articles. Supports filters for date range, article type, and text availability. Returns paginated article summaries (title, authors, journal, identifiers). Pagination is offset-based via retstart/retmax. Each result carries a PMID usable with pubmed_get_article for full metadata. Search and retrieve biomedical research articles from PubMed, PMC, and MeSH databases. Provides structured metadata, full-text extraction, and clinical research filtering. Fulfilled by Parse from ncbi.nlm.nih.gov.

NIH via Parse

NIH: Single Citation Matcher

Resolve a citation to a specific PubMed article using the NCBI ecitmatch utility. When a match is found, returns the full article details including abstract and similar articles. Requires at minimum the journal name and publication year. Search and retrieve biomedical literature from PubMed. Supports full metadata extraction, clinical queries, advanced search syntax, citation matching, and direct E-utilities access. Fulfilled by Parse from pubmed.ncbi.nlm.nih.gov.

NIH via Parse

NIH: Search With Date Filter

Search PubMed articles filtered by publication date range. Returns matching PMIDs and total count. Dates use YYYY/MM/DD format. Search and retrieve biomedical literature from PubMed. Supports full metadata extraction, clinical queries, advanced search syntax, citation matching, and direct E-utilities access. Fulfilled by Parse from pubmed.ncbi.nlm.nih.gov.

NIH via Parse

Snpedia: Get Snp

Retrieve detailed data for a specific SNP, including its genomic location, associated gene, orientation, and list of possible genotypes with their summaries. The rsid is case-insensitive (e.g. rs334 or Rs334). Returns stale_input if the SNP does not exist. Comprehensive API for SNPedia, the wiki for human genetics. Provides endpoints to list and retrieve detailed data for SNPs, genotypes, genes, medical conditions, and medicines. Fulfilled by Parse from snpedia.com.

Snpedia via Parse

NIH: Search Articles

Full-text search over PubMed articles by keyword. Paginates via page number. Each result includes PMID, title, authors, journal, publication date, DOI, and URL. Sort controls ordering; limit controls page size. Search and retrieve biomedical literature from PubMed. Supports full metadata extraction, clinical queries, advanced search syntax, citation matching, and direct E-utilities access. Fulfilled by Parse from pubmed.ncbi.nlm.nih.gov.

NIH via Parse

Hematology: Get Abstracts

List abstracts from the ASH Annual Meeting program with pagination and optional keyword search. Each abstract includes title, ref ID, publication number, abstract URL, authors with credentials and affiliations, topic, categories, and optional session relationship. Results are ordered by publication number ascending. Paginates via integer page counter. Access sessions, presentations, and abstracts from the ASH (American Society of Hematology) Annual Meeting program. Fulfilled by Parse from submit.hematology.org.

Hematology via Parse